CRISPRone

CRISPRone report for GCA_000790825.1_AZPAE14890

♦ Seq 1: JTSY01000044.1 Pseudomonas aeruginosa strain AZPAE14890 AZPAE14890_contig_44, whole genome shotgun sequence

⇒Summary: seq-len = 84808 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16657-23445 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 16657-19878 bp Gene: pfam13280:WYL Type: other Location: 19891-20799 bp Gene: unk Type: unknown Location: 21079-21969 bp Gene: unk Type: unknown Location: 22104-22421 bp Gene: mkCas0115:csx3 Type: other Location: 22414-23445 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTSY01000031.1 Pseudomonas aeruginosa strain AZPAE14890 AZPAE14890_contig_31, whole genome shotgun sequence

⇒Summary: seq-len = 36094 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 99-907 bp Zoom in on locus 1 x14 CRISPR array Location: 99-907 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 99-907 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 99-907 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)