CRISPRone

CRISPRone report for GCA_000790905.1_AZPAE14893

♦ Seq 1: JTSV01000038.1 Pseudomonas aeruginosa strain AZPAE14893 AZPAE14893_contig_38, whole genome shotgun sequence

⇒Summary: seq-len = 198728 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 68194-78706 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 68194-68712 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 68194-68712 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 69485-72166 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 72169-73737 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 73734-74264 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 74274-75416 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 75418-76080 bp Gene: pfam08798:cas6e Type: other Location: 76055-76666 bp Gene: cd09719:cas1 Type: universal Location: 76693-77583 bp Gene: pfam09707:cas2 Type: universal Location: 77580-77879 bp CRISPR array Location: 77944-78706 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 77944-78706 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 68194-68712 bp]: array | spacers
           [Locus range 77944-78706 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)