CRISPRone

CRISPRone report for GCA_000791005.1_AZPAE15025

♦ Seq 1: JTNV01000008.1 Pseudomonas aeruginosa strain AZPAE15025 AZPAE15025_contig_8, whole genome shotgun sequence

⇒Summary: seq-len = 99402 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33560-43944 bp Zoom in on locus 1 x17 x13 CRISPR array Location: 33560-34548 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 33560-34548 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09718:cas1 Type: universal Location: 34808-35782 bp Gene: COG1203:cas3 Type: Type-I Location: 35779-39009 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39067-40371 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40358-41341 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41352-42380 bp Gene: cd09739:cas6f Type: other Location: 42384-42947 bp CRISPR array Location: 43197-43944 bp Num of repeats: 13 Spacers: s17-s28 CRISPR array Location: 43197-43944 bp Num of repeats: 13 Spacers: s17-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33560-34548 bp]: array | spacers
           [Locus range 43197-43944 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)