CRISPRone

CRISPRone report for GCA_000791035.1_AZPAE14898

♦ Seq 1: JTSR01000030.1 Pseudomonas aeruginosa strain AZPAE14898 AZPAE14898_contig_30, whole genome shotgun sequence

⇒Summary: seq-len = 98254 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33563-44968 bp Zoom in on locus 1 x24 x23 CRISPR array Location: 33563-34971 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 33563-34971 bp Num of repeats: 24 Spacers: s1-s23 Gene: cd09718:cas1 Type: universal Location: 35231-36205 bp Gene: COG1203:cas3 Type: Type-I Location: 36202-39432 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39490-40794 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40781-41764 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41775-42803 bp Gene: cd09739:cas6f Type: other Location: 42807-43370 bp CRISPR array Location: 43620-44968 bp Num of repeats: 23 Spacers: s24-s45 CRISPR array Location: 43620-44968 bp Num of repeats: 23 Spacers: s24-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33563-34971 bp]: array | spacers
           [Locus range 43620-44968 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)