CRISPRone

CRISPRone report for GCA_000791065.1_AZPAE14899

♦ Seq 1: JTSQ01000021.1 Pseudomonas aeruginosa strain AZPAE14899 AZPAE14899_contig_21, whole genome shotgun sequence

⇒Summary: seq-len = 314155 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 192451-192899 bp Zoom in on locus 1 x8 CRISPR array Location: 192451-192899 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 192451-192899 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 192451-192899 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTSQ01000007.1 Pseudomonas aeruginosa strain AZPAE14899 AZPAE14899_contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 501993 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 291004-302067 bp Zoom in on locus 1 x14 x17 CRISPR array Location: 291004-291827 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 291004-291827 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09641:cas3HD Type: Type-I Location: 292602-295283 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 295286-296854 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 296851-297381 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 297391-298533 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 298535-299197 bp Gene: pfam08798:cas6e Type: other Location: 299172-299783 bp Gene: cd09719:cas1 Type: universal Location: 299810-300586 bp Gene: pfam09707:cas2 Type: universal Location: 300697-300996 bp CRISPR array Location: 301061-302067 bp Num of repeats: 17 Spacers: s14-s29 CRISPR array Location: 301061-302067 bp Num of repeats: 17 Spacers: s14-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 291004-291827 bp]: array | spacers
           [Locus range 301061-302067 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)