CRISPRone

CRISPRone report for GCA_000791155.1_AZPAE14904

♦ Seq 1: JTSL01000013.1 Pseudomonas aeruginosa strain AZPAE14904 AZPAE14904_contig_13, whole genome shotgun sequence

⇒Summary: seq-len = 44831 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 208-12297 bp Zoom in on locus 1 x62 Gene: cd09739:cas6f Type: other Location: 208-771 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 775-1803 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1814-2668 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2784-4088 bp Gene: COG1203:cas3 Type: Type-I Location: 4146-7376 bp Gene: cd09718:cas1 Type: universal Location: 7373-8347 bp CRISPR array Location: 8609-12297 bp Num of repeats: 62 Spacers: s1-s61 CRISPR array Location: 8609-12297 bp Num of repeats: 62 Spacers: s1-s61 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8609-12297 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTSL01000116.1 Pseudomonas aeruginosa strain AZPAE14904 AZPAE14904_contig_118, whole genome shotgun sequence

⇒Summary: seq-len = 2906 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2280-2908 bp Zoom in on locus 1 x11 CRISPR array Location: 2280-2908 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 2280-2908 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 2280-2908 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JTSL01000139.1 Pseudomonas aeruginosa strain AZPAE14904 AZPAE14904_contig_143, whole genome shotgun sequence

⇒Summary: seq-len = 788 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-798 bp Zoom in on locus 1 x14 CRISPR array Location: 0-798 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 0-798 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-798 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)