CRISPRone

CRISPRone report for GCA_000791365.1_AZPAE15026

♦ Seq 1: JTNU01000022.1 Pseudomonas aeruginosa strain AZPAE15026 AZPAE15026_contig_22, whole genome shotgun sequence

⇒Summary: seq-len = 426924 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 113175-123688 bp Zoom in on locus 1 x8 x14 CRISPR array Location: 113175-113631 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 113175-113631 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09641:cas3HD Type: Type-I Location: 114405-117086 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 117089-118657 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 118654-119184 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 119194-120336 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 120338-121000 bp Gene: pfam08798:cas6e Type: other Location: 120975-121586 bp Gene: cd09719:cas1 Type: universal Location: 121613-122503 bp Gene: pfam09707:cas2 Type: universal Location: 122500-122799 bp CRISPR array Location: 122864-123688 bp Num of repeats: 14 Spacers: s8-s20 CRISPR array Location: 122864-123688 bp Num of repeats: 14 Spacers: s8-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 113175-113631 bp]: array | spacers
           [Locus range 122864-123688 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)