CRISPRone

CRISPRone report for GCA_000791885.1_AZPAE14967

♦ Seq 1: JTQB01000014.1 Pseudomonas aeruginosa strain AZPAE14967 AZPAE14967_contig_14, whole genome shotgun sequence

⇒Summary: seq-len = 35912 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-8826 bp Zoom in on locus 1 x22 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3-734 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 745-1728 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1715-3019 bp Gene: COG1203:cas3 Type: Type-I Location: 3077-6307 bp Gene: cd09718:cas1 Type: universal Location: 6304-7278 bp CRISPR array Location: 7539-8826 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 7539-8826 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 7539-8826 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTQB01000019.1 Pseudomonas aeruginosa strain AZPAE14967 AZPAE14967_contig_19, whole genome shotgun sequence

⇒Summary: seq-len = 258909 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 65394-66442 bp Zoom in on locus 1 x18 CRISPR array Location: 65394-66442 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 65394-66442 bp Num of repeats: 18 Spacers: s1-s17 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 65394-66442 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JTQB01000015.1 Pseudomonas aeruginosa strain AZPAE14967 AZPAE14967_contig_15, whole genome shotgun sequence

⇒Summary: seq-len = 57598 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 60-1767 bp Zoom in on locus 1 x29 CRISPR array Location: 60-1767 bp Num of repeats: 29 Spacers: s1-s28 CRISPR array Location: 60-1767 bp Num of repeats: 29 Spacers: s1-s28 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 60-1767 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)