CRISPRone

CRISPRone report for GCA_000791905.1_AZPAE14965

♦ Seq 1: JTQC01000002.1 Pseudomonas aeruginosa strain AZPAE14965 AZPAE14965_contig_2, whole genome shotgun sequence

⇒Summary: seq-len = 787521 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 304477-314989 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 304477-304995 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 304477-304995 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 305768-308449 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 308452-310020 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 310017-310547 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 310557-311699 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 311701-312363 bp Gene: pfam08798:cas6e Type: other Location: 312338-312949 bp Gene: cd09719:cas1 Type: universal Location: 312976-313866 bp Gene: pfam09707:cas2 Type: universal Location: 313863-314162 bp CRISPR array Location: 314227-314989 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 314227-314989 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 304477-304995 bp]: array | spacers
           [Locus range 314227-314989 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)