CRISPRone

CRISPRone report for GCA_000791965.1_AZPAE14970

♦ Seq 1: JTPY01000072.1 Pseudomonas aeruginosa strain AZPAE14970 AZPAE14970_contig_72, whole genome shotgun sequence

⇒Summary: seq-len = 84462 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 31911-42496 bp Zoom in on locus 1 Gene: cls000170:cas4 Type: Type-I Location: 31911-33455 bp Gene: unk Type: unknown Location: 34539-34718 bp Gene: unk Type: unknown Location: 34902-35300 bp Gene: pfam00078:RT Type: other Location: 35450-36718 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 41627-42496 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTPY01000004.1 Pseudomonas aeruginosa strain AZPAE14970 AZPAE14970_contig_4, whole genome shotgun sequence

⇒Summary: seq-len = 109524 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 46599-47107 bp Zoom in on locus 1 x9 CRISPR array Location: 46599-47107 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 46599-47107 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 46599-47107 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)