CRISPRone

CRISPRone report for GCA_000792065.1_AZPAE14973

♦ Seq 1: JTPV01000009.1 Pseudomonas aeruginosa strain AZPAE14973 AZPAE14973_contig_9, whole genome shotgun sequence

⇒Summary: seq-len = 440916 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 309716-320227 bp Zoom in on locus 1 x8 x14 CRISPR array Location: 309716-310172 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 309716-310172 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09641:cas3HD Type: Type-I Location: 310945-313626 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 313629-315197 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 315194-315724 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 315734-316876 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 316878-317540 bp Gene: pfam08798:cas6e Type: other Location: 317515-318126 bp Gene: cd09719:cas1 Type: universal Location: 318153-319043 bp Gene: pfam09707:cas2 Type: universal Location: 319040-319339 bp CRISPR array Location: 319404-320227 bp Num of repeats: 14 Spacers: s8-s20 CRISPR array Location: 319404-320227 bp Num of repeats: 14 Spacers: s8-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 309716-310172 bp]: array | spacers
           [Locus range 319404-320227 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)