CRISPRone

CRISPRone report for GCA_000792285.1_AZPAE14982

♦ Seq 1: JTPM01000012.1 Pseudomonas aeruginosa strain AZPAE14982 AZPAE14982_contig_12, whole genome shotgun sequence

⇒Summary: seq-len = 141838 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2911-12571 bp Zoom in on locus 1 x3 x16 CRISPR array Location: 2911-3059 bp Num of repeats: 3 Spacers: s1-s2 CRISPR array Location: 2911-3059 bp Num of repeats: 3 Spacers: s1-s2 Gene: cd09739:cas6f Type: other Location: 3242-3805 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3809-4837 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 4848-5831 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5818-7122 bp Gene: COG1203:cas3 Type: Type-I Location: 7180-10410 bp Gene: cd09718:cas1 Type: universal Location: 10407-11381 bp CRISPR array Location: 11642-12571 bp Num of repeats: 16 Spacers: s3-s17 CRISPR array Location: 11642-12571 bp Num of repeats: 16 Spacers: s3-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2911-3059 bp]: array | spacers
           [Locus range 11642-12571 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)