CRISPRone

CRISPRone report for GCA_000792365.1_AZPAE14986

♦ Seq 1: JTPI01000034.1 Pseudomonas aeruginosa strain AZPAE14986 AZPAE14986_contig_34, whole genome shotgun sequence

⇒Summary: seq-len = 75569 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28104-38921 bp Zoom in on locus 1 x25 x2 x10 CRISPR array Location: 28104-29572 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 28104-29572 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 29681-29769 bp Num of repeats: 2 Spacers: s25-s25 CRISPR array Location: 29681-29769 bp Num of repeats: 2 Spacers: s25-s25 Gene: cd09718:cas1 Type: universal Location: 30030-31004 bp Gene: COG1203:cas3 Type: Type-I Location: 31001-34231 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 34289-35593 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 35580-36563 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 36574-37602 bp Gene: cd09739:cas6f Type: other Location: 37606-38169 bp CRISPR array Location: 38354-38921 bp Num of repeats: 10 Spacers: s26-s34 CRISPR array Location: 38354-38921 bp Num of repeats: 10 Spacers: s26-s34 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 28104-29572 bp]: array | spacers
           [Locus range 29681-29769 bp]: array | spacers
           [Locus range 38354-38921 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)