CRISPRone

CRISPRone report for GCA_000792395.1_AZPAE15051

♦ Seq 1: JTMV01000023.1 Pseudomonas aeruginosa strain AZPAE15051 AZPAE15051_contig_23, whole genome shotgun sequence

⇒Summary: seq-len = 218044 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 149505-161542 bp Zoom in on locus 1 x29 x18 CRISPR array Location: 149505-151243 bp Num of repeats: 29 Spacers: s1-s28 CRISPR array Location: 149505-151243 bp Num of repeats: 29 Spacers: s1-s28 Gene: pfam09707:cas2 Type: universal Location: 151308-151607 bp Gene: cd09719:cas1 Type: universal Location: 151604-152494 bp Gene: pfam08798:cas6e Type: other Location: 152521-153060 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 153107-153769 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 153771-154913 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 154923-155453 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 155450-157018 bp Gene: cd09641:cas3HD Type: Type-I Location: 157021-159702 bp CRISPR array Location: 160477-161542 bp Num of repeats: 18 Spacers: s29-s45 CRISPR array Location: 160477-161542 bp Num of repeats: 18 Spacers: s29-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 149505-151243 bp]: array | spacers
           [Locus range 160477-161542 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)