CRISPRone

CRISPRone report for GCA_000792565.1_AZPAE14995

♦ Seq 1: JTOZ01000015.1 Pseudomonas aeruginosa strain AZPAE14995 AZPAE14995_contig_15, whole genome shotgun sequence

⇒Summary: seq-len = 198504 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182189-192397 bp Zoom in on locus 1 x14 x3 CRISPR array Location: 182189-183011 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 182189-183011 bp Num of repeats: 14 Spacers: s1-s13 Gene: pfam09707:cas2 Type: universal Location: 183076-183375 bp Gene: cd09719:cas1 Type: universal Location: 183372-184262 bp Gene: pfam08798:cas6e Type: other Location: 184289-184828 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 184875-185537 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 185539-186681 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 186691-187221 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 187218-188786 bp Gene: cd09641:cas3HD Type: Type-I Location: 188789-191470 bp CRISPR array Location: 192246-192397 bp Num of repeats: 3 Spacers: s14-s15 CRISPR array Location: 192246-192397 bp Num of repeats: 3 Spacers: s14-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182189-183011 bp]: array | spacers
           [Locus range 192246-192397 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)