CRISPRone

CRISPRone report for GCA_000792575.1_AZPAE14996

♦ Seq 1: JTOY01000016.1 Pseudomonas aeruginosa strain AZPAE14996 AZPAE14996_contig_16, whole genome shotgun sequence

⇒Summary: seq-len = 229766 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182660-192622 bp Zoom in on locus 1 x11 x13 CRISPR array Location: 182660-183289 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 182660-183289 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 183553-184527 bp Gene: COG1203:cas3 Type: Type-I Location: 184524-187754 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 187812-189116 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 189103-190086 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 190097-191125 bp Gene: cd09739:cas6f Type: other Location: 191129-191692 bp CRISPR array Location: 191876-192622 bp Num of repeats: 13 Spacers: s11-s22 CRISPR array Location: 191876-192622 bp Num of repeats: 13 Spacers: s11-s22 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 182660-183289 bp]: array | spacers
           [Locus range 191876-192622 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTOY01000008.1 Pseudomonas aeruginosa strain AZPAE14996 AZPAE14996_contig_8, whole genome shotgun sequence

⇒Summary: seq-len = 257022 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 182862-191466 bp Zoom in on locus 1 x13 Gene: cd09641:cas3HD Type: Type-I Location: 182862-185096 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 185147-185821 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 185818-187581 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 187593-188462 bp Gene: pfam01930:cas4 Type: Type-I Location: 188481-189113 bp Gene: cd09721:cas1 Type: universal Location: 189117-190157 bp Gene: cd09725:cas2 Type: universal Location: 190167-190457 bp CRISPR array Location: 190639-191466 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 190639-191466 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 190639-191466 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)