CRISPRone

CRISPRone report for GCA_000792925.1_AZPAE15013

♦ Seq 1: JTOH01000028.1 Pseudomonas aeruginosa strain AZPAE15013 AZPAE15013_contig_28, whole genome shotgun sequence

⇒Summary: seq-len = 108139 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 42200-54319 bp Zoom in on locus 1 x40 x20 CRISPR array Location: 42200-44568 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 42200-44568 bp Num of repeats: 40 Spacers: s1-s39 Gene: cd09718:cas1 Type: universal Location: 44829-45803 bp Gene: COG1203:cas3 Type: Type-I Location: 45800-49030 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 49088-50392 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 50379-51362 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 51373-52401 bp Gene: cd09739:cas6f Type: other Location: 52405-52968 bp CRISPR array Location: 53152-54319 bp Num of repeats: 20 Spacers: s40-s58 CRISPR array Location: 53152-54319 bp Num of repeats: 20 Spacers: s40-s58 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 42200-44568 bp]: array | spacers
           [Locus range 53152-54319 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)