CRISPRone

CRISPRone report for GCA_000793415.1_AZPAE15067

♦ Seq 1: JTMF01000013.1 Pseudomonas aeruginosa strain AZPAE15067 AZPAE15067_contig_13, whole genome shotgun sequence

⇒Summary: seq-len = 506653 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 281796-293712 bp Zoom in on locus 1 x18 x27 CRISPR array Location: 281796-282862 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 281796-282862 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09641:cas3HD Type: Type-I Location: 283636-286317 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 286320-287888 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 287885-288415 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 288425-289567 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 289569-290231 bp Gene: pfam08798:cas6e Type: other Location: 290206-290817 bp Gene: cd09719:cas1 Type: universal Location: 290844-291734 bp Gene: pfam09707:cas2 Type: universal Location: 291731-292030 bp CRISPR array Location: 292095-293712 bp Num of repeats: 27 Spacers: s18-s43 CRISPR array Location: 292095-293712 bp Num of repeats: 27 Spacers: s18-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 281796-282862 bp]: array | spacers
           [Locus range 292095-293712 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)