CRISPRone

CRISPRone report for GCA_000793665.1_AZPAE14917

♦ Seq 1: JTRY01000002.1 Pseudomonas aeruginosa strain AZPAE14917 AZPAE14917_contig_2, whole genome shotgun sequence

⇒Summary: seq-len = 627784 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 473196-483651 bp Zoom in on locus 1 x8 x11 CRISPR array Location: 473196-473654 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 473196-473654 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09641:cas3HD Type: Type-I Location: 474552-477233 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 477236-478804 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 478801-479331 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 479341-480483 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 480485-481147 bp Gene: pfam08798:cas6e Type: other Location: 481122-481733 bp Gene: cd09719:cas1 Type: universal Location: 481760-482650 bp Gene: pfam09707:cas2 Type: universal Location: 482647-482946 bp CRISPR array Location: 483011-483651 bp Num of repeats: 11 Spacers: s8-s17 CRISPR array Location: 483011-483651 bp Num of repeats: 11 Spacers: s8-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 473196-473654 bp]: array | spacers
           [Locus range 483011-483651 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)