CRISPRone

CRISPRone report for GCA_000793885.1_AZPAE14914

♦ Seq 1: JTSB01000020.1 Pseudomonas aeruginosa strain AZPAE14914 AZPAE14914_contig_20, whole genome shotgun sequence

⇒Summary: seq-len = 354812 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53320-65187 bp Zoom in on locus 1 x27 x23 CRISPR array Location: 53320-54905 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 53320-54905 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 55089-55652 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 55656-56684 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 56695-57678 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 57665-58966 bp Gene: COG1203:cas3 Type: Type-I Location: 59377-62607 bp Gene: cd09718:cas1 Type: universal Location: 62604-63578 bp CRISPR array Location: 63839-65187 bp Num of repeats: 23 Spacers: s27-s48 CRISPR array Location: 63839-65187 bp Num of repeats: 23 Spacers: s27-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53320-54905 bp]: array | spacers
           [Locus range 63839-65187 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)