CRISPRone

CRISPRone report for GCA_000793985.1_AZPAE14911

♦ Seq 1: JTSE01000021.1 Pseudomonas aeruginosa strain AZPAE14911 AZPAE14911_contig_21, whole genome shotgun sequence

⇒Summary: seq-len = 241689 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 132061-142755 bp Zoom in on locus 1 x13 x12 CRISPR array Location: 132061-132822 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 132061-132822 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 132887-133186 bp Gene: COG1518:cas1 Type: universal Location: 133183-133632 bp Gene: COG1518:cas1 Type: universal Location: 133639-134073 bp Gene: pfam08798:cas6e Type: other Location: 134100-134639 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 134686-135348 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 135350-136492 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 136502-137032 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 137029-138597 bp Gene: cd09641:cas3HD Type: Type-I Location: 138600-141281 bp CRISPR array Location: 142056-142755 bp Num of repeats: 12 Spacers: s13-s23 CRISPR array Location: 142056-142755 bp Num of repeats: 12 Spacers: s13-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 132061-132822 bp]: array | spacers
           [Locus range 142056-142755 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTSE01000047.1 Pseudomonas aeruginosa strain AZPAE14911 AZPAE14911_contig_47, whole genome shotgun sequence

⇒Summary: seq-len = 59569 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6187-19277 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 6187-6489 bp Gene: cd09641:cas3HD Type: Type-I Location: 16171-18030 bp Gene: unk Type: unknown Location: 18203-18436 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 18972-19277 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)