CRISPRone

CRISPRone report for GCA_000794725.1_AZPAE14699

♦ Seq 1: JTXG01000144.1 Pseudomonas aeruginosa strain AZPAE14699 AZPAE14699_contig_162, whole genome shotgun sequence

⇒Summary: seq-len = 13651 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 841-11526 bp Zoom in on locus 1 x21 x14 CRISPR array Location: 841-2070 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 841-2070 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09718:cas1 Type: universal Location: 2330-3304 bp Gene: COG1203:cas3 Type: Type-I Location: 3301-6531 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6589-7893 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7880-8863 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8874-9902 bp Gene: cd09739:cas6f Type: other Location: 9906-10469 bp CRISPR array Location: 10719-11526 bp Num of repeats: 14 Spacers: s21-s33 CRISPR array Location: 10719-11526 bp Num of repeats: 14 Spacers: s21-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 841-2070 bp]: array | spacers
           [Locus range 10719-11526 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)