CRISPRone

CRISPRone report for GCA_000794785.1_AZPAE14702

♦ Seq 1: JTXD01000028.1 Pseudomonas aeruginosa strain AZPAE14702 AZPAE14702_contig_28, whole genome shotgun sequence

⇒Summary: seq-len = 253722 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 183748-193731 bp Zoom in on locus 1 Gene: COG1199:DinG Type: Subtype-IV-A Location: 183748-186753 bp Gene: unk Type: unknown Location: 186765-188765 bp Gene: unk Type: unknown Location: 188777-189580 bp Gene: cd09696:cas3 Type: Subtype-I-U Location: 189577-192810 bp Gene: pfam13280:WYL Type: other Location: 192823-193731 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTXD01000094.1 Pseudomonas aeruginosa strain AZPAE14702 AZPAE14702_contig_94, whole genome shotgun sequence

⇒Summary: seq-len = 32823 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20777-30192 bp Zoom in on locus 1 x22 Gene: cd09735:cas8f Type: Subtype-I-F Location: 20777-21151 bp CRISPR array Location: 20979-22400 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 20979-22400 bp Num of repeats: 22 Spacers: s1-s21 Gene: unk Type: unknown Location: 21194-21838 bp Gene: unk Type: unknown Location: 22152-22421 bp Gene: cd09725:cas2 Type: universal Location: 22582-22872 bp Gene: cd09721:cas1 Type: universal Location: 22882-23922 bp Gene: pfam01930:cas4 Type: Type-I Location: 23926-24558 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 24577-25446 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 25443-27236 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 27233-27907 bp Gene: cd09641:cas3HD Type: Type-I Location: 27958-30192 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 20979-22400 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)