CRISPRone

CRISPRone report for GCA_000795235.1_AZPAE14821

♦ Seq 1: JTVN01000021.1 Pseudomonas aeruginosa strain AZPAE14821 AZPAE14821_contig_21, whole genome shotgun sequence

⇒Summary: seq-len = 572119 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 223639-234252 bp Zoom in on locus 1 x40 Gene: cd09641:cas3HD Type: Type-I Location: 223639-225873 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 225924-226598 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 226595-228388 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 228385-229254 bp Gene: pfam01930:cas4 Type: Type-I Location: 229273-229905 bp Gene: cd09721:cas1 Type: universal Location: 229909-230949 bp Gene: cd09725:cas2 Type: universal Location: 230959-231249 bp CRISPR array Location: 231431-234051 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 231431-234051 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 231541-231744 bp Gene: cd09735:cas8f Type: Subtype-I-F Location: 233878-234252 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 231431-234051 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)