CRISPRone

CRISPRone report for GCA_000795325.1_AZPAE14825

♦ Seq 1: JTVJ01000027.1 Pseudomonas aeruginosa strain AZPAE14825 AZPAE14825_contig_27, whole genome shotgun sequence

⇒Summary: seq-len = 148651 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 68-11006 bp Zoom in on locus 1 x16 x3 x19 CRISPR array Location: 68-996 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 68-996 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09739:cas6f Type: other Location: 1246-1809 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1813-2841 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2852-3835 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3822-5126 bp Gene: COG1203:cas3 Type: Type-I Location: 5184-8414 bp Gene: cd09718:cas1 Type: universal Location: 8411-9385 bp CRISPR array Location: 9646-9793 bp Num of repeats: 3 Spacers: s16-s17 CRISPR array Location: 9646-9793 bp Num of repeats: 3 Spacers: s16-s17 CRISPR array Location: 9899-11006 bp Num of repeats: 19 Spacers: s18-s35 CRISPR array Location: 9899-11006 bp Num of repeats: 19 Spacers: s18-s35 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 68-996 bp]: array | spacers
           [Locus range 9646-9793 bp]: array | spacers
           [Locus range 9899-11006 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)