CRISPRone

CRISPRone report for GCA_000795345.1_AZPAE14826

♦ Seq 1: JTVI01000035.1 Pseudomonas aeruginosa strain AZPAE14826 AZPAE14826_contig_35, whole genome shotgun sequence

⇒Summary: seq-len = 129580 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 107777-108404 bp Zoom in on locus 1 x11 CRISPR array Location: 107777-108404 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 107777-108404 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 107777-108404 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JTVI01000073.1 Pseudomonas aeruginosa strain AZPAE14826 AZPAE14826_contig_73, whole genome shotgun sequence

⇒Summary: seq-len = 65380 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 55196-60668 bp Zoom in on locus 1 Gene: cd09708:DinG Type: Subtype-IV-A Location: 55196-57370 bp Gene: mkCas0159:csf5gr6 Type: Subtype-IV-A Location: 57459-58184 bp Gene: cd09705:csf1gr8 Type: Subtype-IV-A Location: 58213-58968 bp Gene: cd09706:csf2gr7 Type: Subtype-IV-A Location: 58968-60011 bp Gene: cd09707:csf3gr5 Type: Subtype-IV-A Location: 60018-60668 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)