CRISPRone

CRISPRone report for GCA_000796085.1_AZPAE14402

♦ Seq 1: JTYP01000033.1 Pseudomonas aeruginosa strain AZPAE14402 AZPAE14402_contig_33, whole genome shotgun sequence

⇒Summary: seq-len = 48927 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1026-12419 bp Zoom in on locus 1 x26 x22 CRISPR array Location: 1026-2554 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 1026-2554 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 2815-3789 bp Gene: COG1203:cas3 Type: Type-I Location: 3786-7016 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7074-8378 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8365-9348 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9359-10387 bp Gene: cd09739:cas6f Type: other Location: 10391-10954 bp CRISPR array Location: 11138-12419 bp Num of repeats: 22 Spacers: s26-s46 CRISPR array Location: 11138-12419 bp Num of repeats: 22 Spacers: s26-s46 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1026-2554 bp]: array | spacers
           [Locus range 11138-12419 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)