CRISPRone

CRISPRone report for GCA_000796295.1_AZPAE14442

♦ Seq 1: JTYH01000004.1 Pseudomonas aeruginosa strain AZPAE14442 AZPAE14442_contig_4, whole genome shotgun sequence

⇒Summary: seq-len = 354419 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62970-76047 bp Zoom in on locus 1 x22 x42 CRISPR array Location: 62970-64282 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 62970-64282 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09641:cas3HD Type: Type-I Location: 65056-67737 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 67740-69308 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 69305-69835 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 69845-70987 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 70989-71651 bp Gene: pfam08798:cas6e Type: other Location: 71626-72237 bp Gene: cd09719:cas1 Type: universal Location: 72264-73154 bp Gene: pfam09707:cas2 Type: universal Location: 73151-73450 bp CRISPR array Location: 73515-76047 bp Num of repeats: 42 Spacers: s22-s62 CRISPR array Location: 73515-76047 bp Num of repeats: 42 Spacers: s22-s62 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 62970-64282 bp]: array | spacers
           [Locus range 73515-76047 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)