CRISPRone

CRISPRone report for GCA_000796425.1_AZPAE14509

♦ Seq 1: JTYB01000007.1 Pseudomonas aeruginosa strain AZPAE14509 AZPAE14509_contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 325169 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 112887-123402 bp Zoom in on locus 1 x7 x15 CRISPR array Location: 112887-113282 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 112887-113282 bp Num of repeats: 7 Spacers: s1-s6 Gene: cd09641:cas3HD Type: Type-I Location: 114057-116738 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 116741-118309 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 118306-118836 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 118846-119988 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 119990-120652 bp Gene: pfam08798:cas6e Type: other Location: 120627-121238 bp Gene: cd09719:cas1 Type: universal Location: 121265-122155 bp Gene: pfam09707:cas2 Type: universal Location: 122152-122451 bp CRISPR array Location: 122516-123402 bp Num of repeats: 15 Spacers: s7-s20 CRISPR array Location: 122516-123402 bp Num of repeats: 15 Spacers: s7-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 112887-113282 bp]: array | spacers
           [Locus range 122516-123402 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)