CRISPRone

CRISPRone report for GCA_000796505.1_AZPAE14538

♦ Seq 1: JTXX01000001.1 Pseudomonas aeruginosa strain AZPAE14538 AZPAE14538_contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 993162 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 642717-653592 bp Zoom in on locus 1 x12 x16 CRISPR array Location: 642717-643417 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 642717-643417 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09641:cas3HD Type: Type-I Location: 644189-646870 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 646873-648441 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 648438-648968 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 648978-650120 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 650122-650784 bp Gene: pfam08798:cas6e Type: other Location: 650759-651370 bp Gene: cd09719:cas1 Type: universal Location: 651397-652287 bp Gene: pfam09707:cas2 Type: universal Location: 652284-652583 bp CRISPR array Location: 652648-653592 bp Num of repeats: 16 Spacers: s12-s26 CRISPR array Location: 652648-653592 bp Num of repeats: 16 Spacers: s12-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 642717-643417 bp]: array | spacers
           [Locus range 652648-653592 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)