CRISPRone

CRISPRone report for GCA_000796555.1_AZPAE12136

♦ Seq 1: JUAY01000070.1 Pseudomonas aeruginosa strain AZPAE12136 AZPAE12136_contig_71, whole genome shotgun sequence

⇒Summary: seq-len = 6031 bp; # of CRISPR array = 1; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 441-5830 bp Zoom in on locus 1 x16 CRISPR array Location: 441-1369 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 441-1369 bp Num of repeats: 16 Spacers: s1-s15 Gene: cd09718:cas1 Type: universal Location: 1629-2603 bp Gene: COG1203:cas3 Type: Type-I Location: 2600-5830 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 441-1369 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JUAY01000022.1 Pseudomonas aeruginosa strain AZPAE12136 AZPAE12136_contig_23, whole genome shotgun sequence

⇒Summary: seq-len = 5104 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 581-4849 bp Zoom in on locus 1 x4 CRISPR array Location: 581-789 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 581-789 bp Num of repeats: 4 Spacers: s1-s3 Gene: cd09739:cas6f Type: other Location: 972-1535 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1539-2567 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2578-3561 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3548-4849 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 581-789 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JUAY01000016.1 Pseudomonas aeruginosa strain AZPAE12136 AZPAE12136_contig_17, whole genome shotgun sequence

⇒Summary: seq-len = 51499 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 106-493 bp Zoom in on locus 1 x7 CRISPR array Location: 106-493 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 106-493 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 106-493 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JUAY01000021.1 Pseudomonas aeruginosa strain AZPAE12136 AZPAE12136_contig_22, whole genome shotgun sequence

⇒Summary: seq-len = 115303 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 442-1190 bp Zoom in on locus 1 x13 CRISPR array Location: 442-1190 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 442-1190 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 442-1190 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)