CRISPRone

CRISPRone report for GCA_000796875.1_AZPAE12151

♦ Seq 1: JUAL01000020.1 Pseudomonas aeruginosa strain AZPAE12151 AZPAE12151_contig_20, whole genome shotgun sequence

⇒Summary: seq-len = 186873 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38303-48662 bp Zoom in on locus 1 x14 x11 CRISPR array Location: 38303-39111 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 38303-39111 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 39294-39857 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 39861-40889 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40900-41883 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 41870-43171 bp Gene: COG1203:cas3 Type: Type-I Location: 43582-46812 bp Gene: cd09718:cas1 Type: universal Location: 46809-47783 bp CRISPR array Location: 48035-48662 bp Num of repeats: 11 Spacers: s14-s23 CRISPR array Location: 48035-48662 bp Num of repeats: 11 Spacers: s14-s23 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38303-39111 bp]: array | spacers
           [Locus range 48035-48662 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)