CRISPRone

CRISPRone report for GCA_000796925.1_AZPAE12153

♦ Seq 1: JUAJ01000010.1 Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_10, whole genome shotgun sequence

⇒Summary: seq-len = 223334 bp; # of CRISPR array = 2; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 191034-201354 bp Zoom in on locus 1 x14 x16 CRISPR array Location: 191034-191841 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 191034-191841 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09739:cas6f Type: other Location: 192024-192587 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 192591-193619 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 193630-193893 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 193897-194613 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 194600-195904 bp Gene: COG1203:cas3 Type: Type-I Location: 195962-199192 bp Gene: cd09718:cas1 Type: universal Location: 199189-200163 bp CRISPR array Location: 200424-201354 bp Num of repeats: 16 Spacers: s14-s28 CRISPR array Location: 200424-201354 bp Num of repeats: 16 Spacers: s14-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 191034-191841 bp]: array | spacers
           [Locus range 200424-201354 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)