CRISPRone

CRISPRone report for GCA_000797305.1_AZPAE12421

♦ Seq 1: JTZT01000053.1 Pseudomonas aeruginosa strain AZPAE12421 AZPAE12421_contig_53, whole genome shotgun sequence

⇒Summary: seq-len = 74096 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36894-45560 bp Zoom in on locus 1 x14 Gene: cd09641:cas3HD Type: Type-I Location: 36894-39128 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 39179-39853 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 39850-41613 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 41625-42494 bp Gene: pfam01930:cas4 Type: Type-I Location: 42513-43145 bp Gene: cd09721:cas1 Type: universal Location: 43265-44188 bp Gene: cd09725:cas2 Type: universal Location: 44198-44488 bp CRISPR array Location: 44670-45560 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 44670-45560 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 44670-45560 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)