CRISPRone

CRISPRone report for GCA_000937495.2_ASM93749v2

♦ Seq 1: JYGB02000005.1 Pseudomonas aeruginosa strain MRSN 17623 scaffold00005, whole genome shotgun sequence

⇒Summary: seq-len = 709000 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 223508-234667 bp Zoom in on locus 1 x32 x12 CRISPR array Location: 223508-225396 bp Num of repeats: 32 Spacers: s1-s31 CRISPR array Location: 223508-225396 bp Num of repeats: 32 Spacers: s1-s31 Gene: cd09718:cas1 Type: universal Location: 225657-226631 bp Gene: COG1203:cas3 Type: Type-I Location: 226628-229858 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 229916-231220 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 231207-232190 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 232201-233229 bp Gene: cd09739:cas6f Type: other Location: 233233-233796 bp CRISPR array Location: 233980-234667 bp Num of repeats: 12 Spacers: s32-s42 CRISPR array Location: 233980-234667 bp Num of repeats: 12 Spacers: s32-s42 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 223508-225396 bp]: array | spacers
           [Locus range 233980-234667 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)