CRISPRone

CRISPRone report for GCA_001007395.1_ASM100739v1

♦ Seq 1: LCSW01000001.1 Pseudomonas aeruginosa strain Pae_CF67.01m CF67.01m_contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 71915 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21974-33781 bp Zoom in on locus 1 x23 x26 CRISPR array Location: 21974-23323 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21974-23323 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 23583-24557 bp Gene: COG1203:cas3 Type: Type-I Location: 24554-27784 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28195-29496 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29483-30466 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30477-31505 bp Gene: cd09739:cas6f Type: other Location: 31509-32072 bp CRISPR array Location: 32257-33781 bp Num of repeats: 26 Spacers: s23-s47 CRISPR array Location: 32257-33781 bp Num of repeats: 26 Spacers: s23-s47 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21974-23323 bp]: array | spacers
           [Locus range 32257-33781 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LCSW01000005.1 Pseudomonas aeruginosa strain Pae_CF67.01m CF67.01m_contig_5, whole genome shotgun sequence

⇒Summary: seq-len = 209922 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16878-17506 bp Zoom in on locus 1 x11 CRISPR array Location: 16878-17506 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 16878-17506 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 16878-17506 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)