CRISPRone

CRISPRone report for GCA_001023845.1_ASM102384v1

♦ Seq 1: LDLS01000073.1 Pseudomonas aeruginosa strain Pae_CF67.04d CF67.04d_contig_73, whole genome shotgun sequence

⇒Summary: seq-len = 495 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 177-506 bp Zoom in on locus 1 x6 CRISPR array Location: 177-506 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 177-506 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 177-506 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LDLS01000057.1 Pseudomonas aeruginosa strain Pae_CF67.04d CF67.04d_contig_57, whole genome shotgun sequence

⇒Summary: seq-len = 11019 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 713-10811 bp Zoom in on locus 1 x23 CRISPR array Location: 713-2062 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 713-2062 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2322-3296 bp Gene: COG1203:cas3 Type: Type-I Location: 3293-6523 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6934-8235 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8222-9205 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9216-10244 bp Gene: cd09739:cas6f Type: other Location: 10248-10811 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 713-2062 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)