CRISPRone

CRISPRone report for GCA_001023895.1_ASM102389v1

♦ Seq 1: LDLY01000043.1 Pseudomonas aeruginosa strain Pae_CF67.04j CF67.04j_contig_43, whole genome shotgun sequence

⇒Summary: seq-len = 62344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-89 bp Zoom in on locus 1 x2 CRISPR array Location: 1-89 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 1-89 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-89 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LDLY01000044.1 Pseudomonas aeruginosa strain Pae_CF67.04j CF67.04j_contig_44, whole genome shotgun sequence

⇒Summary: seq-len = 10632 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 213-10311 bp Zoom in on locus 1 x23 Gene: cd09739:cas6f Type: other Location: 213-776 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 780-1808 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1819-2802 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2789-4090 bp Gene: COG1203:cas3 Type: Type-I Location: 4501-7731 bp Gene: cd09718:cas1 Type: universal Location: 7728-8702 bp CRISPR array Location: 8963-10311 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 8963-10311 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8963-10311 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LDLY01000106.1 Pseudomonas aeruginosa strain Pae_CF67.04j CF67.04j_contig_106, whole genome shotgun sequence

⇒Summary: seq-len = 444 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-445 bp Zoom in on locus 1 x8 CRISPR array Location: 1-445 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 1-445 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-445 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LDLY01000049.1 Pseudomonas aeruginosa strain Pae_CF67.04j CF67.04j_contig_49, whole genome shotgun sequence

⇒Summary: seq-len = 39024 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-869 bp Zoom in on locus 1 x15 CRISPR array Location: 1-869 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 1-869 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-869 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)