CRISPRone

CRISPRone report for GCA_001024055.1_ASM102405v1

♦ Seq 1: LDLA01000137.1 Pseudomonas aeruginosa strain Pae_CF67.03d CF67.03d_contig_137, whole genome shotgun sequence

⇒Summary: seq-len = 204 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-205 bp Zoom in on locus 1 x4 CRISPR array Location: 1-205 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1-205 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-205 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LDLA01000047.1 Pseudomonas aeruginosa strain Pae_CF67.03d CF67.03d_contig_47, whole genome shotgun sequence

⇒Summary: seq-len = 31987 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-10611 bp Zoom in on locus 1 x6 x23 CRISPR array Location: 1-329 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 1-329 bp Num of repeats: 6 Spacers: s1-s5 Gene: cd09739:cas6f Type: other Location: 513-1076 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1080-2108 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2119-3102 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3089-4390 bp Gene: COG1203:cas3 Type: Type-I Location: 4801-8031 bp Gene: cd09718:cas1 Type: universal Location: 8028-9002 bp CRISPR array Location: 9263-10611 bp Num of repeats: 23 Spacers: s6-s27 CRISPR array Location: 9263-10611 bp Num of repeats: 23 Spacers: s6-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1-329 bp]: array | spacers
           [Locus range 9263-10611 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LDLA01000052.1 Pseudomonas aeruginosa strain Pae_CF67.03d CF67.03d_contig_52, whole genome shotgun sequence

⇒Summary: seq-len = 39063 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38135-39064 bp Zoom in on locus 1 x16 CRISPR array Location: 38135-39064 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 38135-39064 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 38135-39064 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LDLA01000005.1 Pseudomonas aeruginosa strain Pae_CF67.03d CF67.03d_contig_5, whole genome shotgun sequence

⇒Summary: seq-len = 112499 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110979-111607 bp Zoom in on locus 1 x11 CRISPR array Location: 110979-111607 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 110979-111607 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 110979-111607 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)