CRISPRone

CRISPRone report for GCA_001024325.1_ASM102432v1

♦ Seq 1: LDMF01000100.1 Pseudomonas aeruginosa strain Pae_CF67.04q CF67.04q_contig_100, whole genome shotgun sequence

⇒Summary: seq-len = 4215 bp; # of CRISPR array = 0; # of cas gene = 2  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 280-4214 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 280-1254 bp Gene: COG1203:cas3 Type: Type-I Location: 1251-4214 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LDMF01000051.1 Pseudomonas aeruginosa strain Pae_CF67.04q CF67.04q_contig_51, whole genome shotgun sequence

⇒Summary: seq-len = 84296 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62363-62991 bp Zoom in on locus 1 x11 CRISPR array Location: 62363-62991 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 62363-62991 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62363-62991 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LDMF01000118.1 Pseudomonas aeruginosa strain Pae_CF67.04q CF67.04q_contig_118, whole genome shotgun sequence

⇒Summary: seq-len = 4764 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2-4556 bp Zoom in on locus 1 Gene: cd09673:cas3f Type: Subtype-I-F Location: 2-286 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 697-1998 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1985-2968 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2979-3989 bp Gene: cd09739:cas6f Type: other Location: 3993-4556 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LDMF01000087.1 Pseudomonas aeruginosa strain Pae_CF67.04q CF67.04q_contig_87, whole genome shotgun sequence

⇒Summary: seq-len = 39419 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38135-39420 bp Zoom in on locus 1 x22 CRISPR array Location: 38135-39420 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 38135-39420 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 38135-39420 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)