CRISPRone

CRISPRone report for GCA_001024395.1_ASM102439v1

♦ Seq 1: LDKM01000130.1 Pseudomonas aeruginosa strain Pae_CF67.02j CF67.02j_contig_130, whole genome shotgun sequence

⇒Summary: seq-len = 1197 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 982-1194 bp Zoom in on locus 1 Gene: cd09693:cas5 Type: Type-I Location: 982-1194 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LDKM01000063.1 Pseudomonas aeruginosa strain Pae_CF67.02j CF67.02j_contig_63, whole genome shotgun sequence

⇒Summary: seq-len = 55987 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 323-952 bp Zoom in on locus 1 x11 CRISPR array Location: 323-952 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 323-952 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 323-952 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LDKM01000070.1 Pseudomonas aeruginosa strain Pae_CF67.02j CF67.02j_contig_70, whole genome shotgun sequence

⇒Summary: seq-len = 48650 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38135-48371 bp Zoom in on locus 1 x27 CRISPR array Location: 38135-39720 bp Num of repeats: 27 Spacers: s1-s26 CRISPR array Location: 38135-39720 bp Num of repeats: 27 Spacers: s1-s26 Gene: cd09739:cas6f Type: other Location: 39904-40467 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40471-41265 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41488-42471 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42458-43759 bp Gene: COG1203:cas3 Type: Type-I Location: 44170-47400 bp Gene: cd09718:cas1 Type: universal Location: 47397-48371 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38135-39720 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)