CRISPRone

CRISPRone report for GCA_001024755.1_ASM102475v1

♦ Seq 1: LDML01000029.1 Pseudomonas aeruginosa strain Pae_CF67.05c CF67.05c_contig_29, whole genome shotgun sequence

⇒Summary: seq-len = 59566 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20625-21433 bp Zoom in on locus 1 x14 CRISPR array Location: 20625-21433 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 20625-21433 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 20625-21433 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LDML01000140.1 Pseudomonas aeruginosa strain Pae_CF67.05c CF67.05c_contig_141, whole genome shotgun sequence

⇒Summary: seq-len = 257 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-258 bp Zoom in on locus 1 x5 CRISPR array Location: 0-258 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 0-258 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-258 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LDML01000096.1 Pseudomonas aeruginosa strain Pae_CF67.05c CF67.05c_contig_96, whole genome shotgun sequence

⇒Summary: seq-len = 8752 bp; # of CRISPR array = 0; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 279-8545 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 279-1253 bp Gene: COG1203:cas3 Type: Type-I Location: 1250-4360 bp Gene: cd09735:cas8f Type: Subtype-I-F Location: 4771-5571 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5591-6007 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5994-6977 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7400-7978 bp Gene: cd09739:cas6f Type: other Location: 7982-8545 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LDML01000115.1 Pseudomonas aeruginosa strain Pae_CF67.05c CF67.05c_contig_116, whole genome shotgun sequence

⇒Summary: seq-len = 819 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 323-832 bp Zoom in on locus 1 x9 CRISPR array Location: 323-832 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 323-832 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 323-832 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)