CRISPRone

CRISPRone report for GCA_001024835.1_ASM102483v1

♦ Seq 1: LDMP01000063.1 Pseudomonas aeruginosa strain Pae_CF67.05g CF67.05g_contig_63, whole genome shotgun sequence

⇒Summary: seq-len = 62398 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62311-62398 bp Zoom in on locus 1 x2 CRISPR array Location: 62311-62398 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 62311-62398 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62311-62398 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LDMP01000082.1 Pseudomonas aeruginosa strain Pae_CF67.05g CF67.05g_contig_82, whole genome shotgun sequence

⇒Summary: seq-len = 809 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-809 bp Zoom in on locus 1 x14 CRISPR array Location: 1-809 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 1-809 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-809 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LDMP01000075.1 Pseudomonas aeruginosa strain Pae_CF67.05g CF67.05g_contig_75, whole genome shotgun sequence

⇒Summary: seq-len = 10872 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-10551 bp Zoom in on locus 1 x5 x23 CRISPR array Location: 1-269 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 1-269 bp Num of repeats: 5 Spacers: s1-s4 Gene: cd09739:cas6f Type: other Location: 453-1016 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1020-2048 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2059-3042 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3029-4330 bp Gene: COG1203:cas3 Type: Type-I Location: 4741-7971 bp Gene: cd09718:cas1 Type: universal Location: 7968-8942 bp CRISPR array Location: 9203-10551 bp Num of repeats: 23 Spacers: s5-s26 CRISPR array Location: 9203-10551 bp Num of repeats: 23 Spacers: s5-s26 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1-269 bp]: array | spacers
           [Locus range 9203-10551 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)