CRISPRone

CRISPRone report for GCA_001024925.1_ASM102492v1

♦ Seq 1: LDMU01000056.1 Pseudomonas aeruginosa strain Pae_CF67.05m CF67.05m_contig_56, whole genome shotgun sequence

⇒Summary: seq-len = 38733 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38135-38704 bp Zoom in on locus 1 x10 CRISPR array Location: 38135-38704 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 38135-38704 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 38135-38704 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LDMU01000078.1 Pseudomonas aeruginosa strain Pae_CF67.05m CF67.05m_contig_78, whole genome shotgun sequence

⇒Summary: seq-len = 10222 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 289-9411 bp Zoom in on locus 1 x8 Gene: cd09718:cas1 Type: universal Location: 289-1263 bp Gene: COG1203:cas3 Type: Type-I Location: 1260-4490 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4901-6202 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6189-7172 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7183-8211 bp Gene: cd09739:cas6f Type: other Location: 8215-8778 bp CRISPR array Location: 8963-9411 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 8963-9411 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8963-9411 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)