CRISPRone

CRISPRone report for GCA_001024955.1_ASM102495v1

♦ Seq 1: LDMW01000026.1 Pseudomonas aeruginosa strain Pae_CF67.05o CF67.05o_contig_26, whole genome shotgun sequence

⇒Summary: seq-len = 105561 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 323-952 bp Zoom in on locus 1 x11 CRISPR array Location: 323-952 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 323-952 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 323-952 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LDMW01000070.1 Pseudomonas aeruginosa strain Pae_CF67.05o CF67.05o_contig_70, whole genome shotgun sequence

⇒Summary: seq-len = 50814 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 813-12680 bp Zoom in on locus 1 x23 x27 CRISPR array Location: 813-2162 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 813-2162 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2422-3396 bp Gene: COG1203:cas3 Type: Type-I Location: 3393-6623 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7034-8335 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8322-9305 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9316-10344 bp Gene: cd09739:cas6f Type: other Location: 10348-10911 bp CRISPR array Location: 11096-12680 bp Num of repeats: 27 Spacers: s23-s48 CRISPR array Location: 11096-12680 bp Num of repeats: 27 Spacers: s23-s48 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 813-2162 bp]: array | spacers
           [Locus range 11096-12680 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)