CRISPRone

CRISPRone report for GCA_001034665.1_ASM103466v1

♦ Seq 1: LEEW01000012.1 Pseudomonas aeruginosa strain Pae_CF67.05s CF67.05s_contig_12, whole genome shotgun sequence

⇒Summary: seq-len = 62558 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62291-62558 bp Zoom in on locus 1 x5 CRISPR array Location: 62291-62558 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 62291-62558 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62291-62558 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEEW01000024.1 Pseudomonas aeruginosa strain Pae_CF67.05s CF67.05s_contig_24, whole genome shotgun sequence

⇒Summary: seq-len = 382531 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-451 bp Zoom in on locus 1 x8 CRISPR array Location: 3-451 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 3-451 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 3-451 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEEW01000011.1 Pseudomonas aeruginosa strain Pae_CF67.05s CF67.05s_contig_11, whole genome shotgun sequence

⇒Summary: seq-len = 39299 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-1165 bp Zoom in on locus 1 x20 CRISPR array Location: 1-1165 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 1-1165 bp Num of repeats: 20 Spacers: s1-s19 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-1165 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LEEW01000038.1 Pseudomonas aeruginosa strain Pae_CF67.05s CF67.05s_contig_38, whole genome shotgun sequence

⇒Summary: seq-len = 32293 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21987-32085 bp Zoom in on locus 1 x23 CRISPR array Location: 21987-23336 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 21987-23336 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 23596-24570 bp Gene: COG1203:cas3 Type: Type-I Location: 24567-27797 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 28208-29509 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 29496-30479 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 30490-31518 bp Gene: cd09739:cas6f Type: other Location: 31522-32085 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21987-23336 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)