CRISPRone

CRISPRone report for GCA_001034675.1_ASM103467v1

♦ Seq 1: LEFF01000046.1 Pseudomonas aeruginosa strain Pae_CF67.06h CF67.06h_contig_46, whole genome shotgun sequence

⇒Summary: seq-len = 50733 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 822-12629 bp Zoom in on locus 1 x23 x26 CRISPR array Location: 822-2171 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 822-2171 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 2431-3405 bp Gene: COG1203:cas3 Type: Type-I Location: 3402-6632 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7043-8344 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8331-9314 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9325-10353 bp Gene: cd09739:cas6f Type: other Location: 10357-10920 bp CRISPR array Location: 11105-12629 bp Num of repeats: 26 Spacers: s23-s47 CRISPR array Location: 11105-12629 bp Num of repeats: 26 Spacers: s23-s47 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 822-2171 bp]: array | spacers
           [Locus range 11105-12629 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)