CRISPRone

CRISPRone report for GCA_001034685.1_ASM103468v1

♦ Seq 1: LEFH01000088.1 Pseudomonas aeruginosa strain Pae_CF67.06j CF67.06j_contig_88, whole genome shotgun sequence

⇒Summary: seq-len = 19876 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 9566-19664 bp Zoom in on locus 1 x23 CRISPR array Location: 9566-10915 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 9566-10915 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 11175-12149 bp Gene: COG1203:cas3 Type: Type-I Location: 12146-15376 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 15787-17088 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 17075-18058 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 18069-19097 bp Gene: cd09739:cas6f Type: other Location: 19101-19664 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 9566-10915 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEFH01000128.1 Pseudomonas aeruginosa strain Pae_CF67.06j CF67.06j_contig_128, whole genome shotgun sequence

⇒Summary: seq-len = 8603 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-199 bp Zoom in on locus 1 x4 CRISPR array Location: 0-199 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 0-199 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-199 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)