CRISPRone

CRISPRone report for GCA_001034745.1_ASM103474v1

♦ Seq 1: LEFS01000018.1 Pseudomonas aeruginosa strain Pae_CF67.07b CF67.07b_contig_18, whole genome shotgun sequence

⇒Summary: seq-len = 102810 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 92504-102602 bp Zoom in on locus 1 x23 CRISPR array Location: 92504-93853 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 92504-93853 bp Num of repeats: 23 Spacers: s1-s22 Gene: cd09718:cas1 Type: universal Location: 94113-95087 bp Gene: COG1203:cas3 Type: Type-I Location: 95084-98314 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 98725-100026 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 100013-100996 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 101007-102035 bp Gene: cd09739:cas6f Type: other Location: 102039-102602 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 92504-93853 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEFS01000031.1 Pseudomonas aeruginosa strain Pae_CF67.07b CF67.07b_contig_31, whole genome shotgun sequence

⇒Summary: seq-len = 337586 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 337198-337587 bp Zoom in on locus 1 x7 CRISPR array Location: 337198-337587 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 337198-337587 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 337198-337587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEFS01000038.1 Pseudomonas aeruginosa strain Pae_CF67.07b CF67.07b_contig_38, whole genome shotgun sequence

⇒Summary: seq-len = 39003 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38135-39004 bp Zoom in on locus 1 x15 CRISPR array Location: 38135-39004 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 38135-39004 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 38135-39004 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)