CRISPRone

CRISPRone report for GCA_001034825.1_ASM103482v1

♦ Seq 1: LEFZ01000030.1 Pseudomonas aeruginosa strain Pae_CF67.07i CF67.07i_contig_30, whole genome shotgun sequence

⇒Summary: seq-len = 32297 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 213-10311 bp Zoom in on locus 1 x23 Gene: cd09739:cas6f Type: other Location: 213-776 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 780-1808 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1819-2802 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2789-4090 bp Gene: COG1203:cas3 Type: Type-I Location: 4501-7731 bp Gene: cd09718:cas1 Type: universal Location: 7728-8702 bp CRISPR array Location: 8963-10311 bp Num of repeats: 23 Spacers: s1-s22 CRISPR array Location: 8963-10311 bp Num of repeats: 23 Spacers: s1-s22 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 8963-10311 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: LEFZ01000057.1 Pseudomonas aeruginosa strain Pae_CF67.07i CF67.07i_contig_57, whole genome shotgun sequence

⇒Summary: seq-len = 39035 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33-901 bp Zoom in on locus 1 x15 CRISPR array Location: 33-901 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 33-901 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 33-901 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: LEFZ01000016.1 Pseudomonas aeruginosa strain Pae_CF67.07i CF67.07i_contig_16, whole genome shotgun sequence

⇒Summary: seq-len = 464761 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 62432-62820 bp Zoom in on locus 1 x7 CRISPR array Location: 62432-62820 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 62432-62820 bp Num of repeats: 7 Spacers: s1-s6 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 62432-62820 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: LEFZ01000099.1 Pseudomonas aeruginosa strain Pae_CF67.07i CF67.07i_contig_99, whole genome shotgun sequence

⇒Summary: seq-len = 204 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1-204 bp Zoom in on locus 1 x4 CRISPR array Location: 1-204 bp Num of repeats: 4 Spacers: s1-s3 CRISPR array Location: 1-204 bp Num of repeats: 4 Spacers: s1-s3 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1-204 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)